BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A06LP1|AL424885
(192 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 265 2e-71
>3x_Contig1781
Length = 20717
Score = 265 bits (132), Expect = 2e-71
Identities = 175/186 (94%), Gaps = 4/186 (2%)
Strand = Plus / Plus
Query: 8 cccaaagggcgataaagcttctaagttcaaagccaagaacaacagcaacaatagttatag 67
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 9040 cccaaagggcgataaagcttctaagtacaaagccaagaacaacagcaacaatagtaatag 9099
Query: 68 ttattytggtaacactaatcacaacacaaacggcaacagttcacataattycccatcacc 127
| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9100 taattctggtaacactaatcacaacacaaacggcaacagttcacataattccccatcacc 9159
Query: 128 agaactctcgttaaa-caaggtaatt-cacgctt-aatakagctcagtg-aatcccgtaa 183
||||||||||||||| |||||||||| ||||||| || | ||||||||| ||||||||||
Sbjct: 9160 agaactctcgttaaaccaaggtaattccacgcttaaaaagagctcagtgaaatcccgtaa 9219
Query: 184 tgacaa 189
||||||
Sbjct: 9220 tgacaa 9225
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1146
Number of Sequences: 1807
Number of extensions: 1146
Number of successful extensions: 153
Number of sequences better than 1.0e-20: 1
length of query: 192
length of database: 10,358,551
effective HSP length: 15
effective length of query: 177
effective length of database: 10,331,446
effective search space: 1828665942
effective search space used: 1828665942
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (99.0 bits)